miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|160440049|gb|EY208773.1|EY208773 CTTTGAGGGCGAATGGGGCCATGTACGCTACACTGTAAAAGTTACACTCGATCGACCCTGGAAATTCGATCAGGAGAGTA
AAATGGCATTCACGGTGATCTCTCCGGTGGATCTGAATCTCAATCCGCGCGTTAAGGAGCAGTTCAAATTGGATCTGGAG
AAGTCTTTCTGTTGTCTGTGCTGTCGCTCAGGTCCCCTATCCACTATTGTCATTGTTCCCGTGACGGGATTTGTGTCTGG
ACAGGTGATTCCTATTACGGCCGAATGTGACAATGCTAGCAATGTGCAAGTAACCGGCATGAAGGTTTACATGCGTAAGA
TAATCTCCTTCCACACCCATACACCTCGCCGAGAGACCAAGAAGGACAAGGTAAACATCTCGGAAGTGTCTGGAGGTGCC
ACAGAACCCGGTGGTTCAAACACTTGGACATTCAAGTTGGAAATTCCACCACTTCCACCATCGAATTTGGTCAATTGTGG
CATCATTGATGTTGATTACGATCTCAAGATTGTCGTGGAAGTGGCTGGAGCTCATAGAAATCTCGAAGGAAAGATTCCCA
TAACTCTGGGTACAGTTCCATTGGCGGAATTTAAGTCCCCTGCACCCTATAAGGACGAACCACCGCAGGATCCATCGATG
TTGCCTACTCAGCCCGTGA




Most similar to sp|Q5R5L7|ARRD3_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5R5L7|ARRD3_PONAB Arrestin domain-containing protein 3 OS=Pongo
           abelii GN=ARRDC3 PE=2 SV=1
          Length = 414

 Score =  109 bits (273), Expect = 1e-23
 Identities = 70/200 (35%), Positives = 106/200 (53%), Gaps = 1/200 (0%)
 Frame = +2

Query: 2   FEGEWGHVRYTVKVTLDRPWKFDQESKMAFTVISPVDLNLNPRVKEQFKLDLEKSFCCLC 181
           FEG  G VRY VK  L RPW    + K  FTV   +D+N  P +        EK+ CC  
Sbjct: 127 FEGRHGSVRYWVKAELHRPWLLPVKLKKEFTVFEHIDIN-TPSLLSPQAGTKEKTLCCWF 185

Query: 182 CRSGPLSTIVIVPVTGFVSGQVIPITAECDNASNVQVTGMKVYMRKIISFHTHTPRRETK 361
           C SGP+S    +   G+  G+ I I AE +N S+  V   K  + +  +F+     +E K
Sbjct: 186 CTSGPISLSAKIERKGYTPGESIQIYAEIENCSSRMVV-PKAAIYQTQAFYAKGKMKEVK 244

Query: 362 KDKVNISEVSGGATEPGGSNTWTFK-LEIPPLPPSNLVNCGIIDVDYDLKIVVEVAGAHR 538
           +    ++ + G +   G + TW  K L+IPP+ PS +++C II V+Y L + V++ GA  
Sbjct: 245 Q---LVANLRGESLSSGKTETWNGKLLKIPPVSPS-ILDCSIIRVEYSLMVYVDIPGA-M 299

Query: 539 NLEGKIPITLGTVPLAEFKS 598
           +L   +P+ +GT+PL  F S
Sbjct: 300 DLFLNLPLVIGTIPLHPFGS 319